3D-GNOME - 3D chromatin organization webserver
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Protein, DNA, RNA, Glycan modeling. Protein-protein docking, template-based docking. Hotspots, Interace residues, PPI modulators. Binding pockets and ligand-pocket datasets. Peptides, antibodies, epitopes. Manage collections - chemical space. ADMET- physchem predictions - related tools. To simplify, I ha.
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3D-GNOME - 3D chromatin organization webserverDESCRIPTION
3D-GNOME - 3D chromatin organization webservice. 3D genome organization plays a critical role in its functioning. The recent advent of Chromosome Conformation Capture 3C based techniques such as ChIA-PET and Hi-C allows us to investigate this organization by means of either creating a contact map or heatmap representing the frequency of interactions between pairs of genomic loci, or by identifying a set of strong, confident interactions. Laboratory of Functional and Structural Genomics, CeNT, 2016.CONTENT
This website had the following on the web page, "3D-GNOME - 3D chromatin organization webservice." Our analyzers analyzed that the web site said " 3D genome organization plays a critical role in its functioning." The Website also stated " The recent advent of Chromosome Conformation Capture 3C based techniques such as ChIA-PET and Hi-C allows us to investigate this organization by means of either creating a contact map or heatmap representing the frequency of interactions between pairs of genomic loci, or by identifying a set of strong, confident interactions. Laboratory of Functional and Structural Genomics, CeNT, 2016."OTHER BUSINESSES
Identification of mycobacterial membrane proteins and their types using over-represented tripeptide compositions.
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To model a GPCR look for the navigation bar at the top of the page and click on Model a GPCR. This will take you to a new window where you can choose to either input a GPCR sequence or use a known Uniprot ID for homology modeling.
Here you can submit any RNA PDB structure and get detailed insights about the residue preference at each point in the sequence, elucidating both key structural and functional roles. Input PDB File and Parameters. If you would like to receive an email upon completion of the run please enter it below.